Millennium Nucleus for Fungal Integrative and Synthetic Biology

Aquí encontraras las publicaciones del MNFISB, financiadas por la Iniciativa Científica Milenio.


[29] Salinas, F., Rojas, V., Delgado, V., Agosin, E. and Larrondo, L.F. "Optogenetic switches for light-controlled gene expression in yeast". Appl. Microbial. Biotechnol. In Press.


[28] Hallin, J., Martens, K., Young, A.I., Zackrisson, M., Salinas, F., Parts, L., Karringer, J. and Liti, G. Nat Commun. 7:13311, 2016 PUBMED

[27] Thompson, D.A. and
Cubillos, F.A. "Natural gene expression variation studies in yeast". Yeast Epub ahead. 2016, Sep 26 PUBMED

[26] Godoy, L., Vera-Wolf, P., Martinez, C., Ugalde, J.A. and
Ganga, M.A. "Comparative transcriptome assembly and genome-guided profiling for Brettanomyces bruxellensis LAMAP2480 during p-coumaric acid stress" Sci Rep 6:34304, 2016 PUBMED

[25] Gonzalez, C., Godoy, L. and
Ganga, M.A. "Identification of a second PAD1 in Brettanomyces bruxellensis LAMAP24280". Antonio Van Leeuwenhoek. Epub ahead. 2016, Oct 22 PUBMED

Carmona, L., Varela, J., Godoy, L. and Ganga, M.A. "Comparative proteome analysis of Brettanomyces bruxellensis under hydroxycinnamic acid growth". Electronic Journal of Biotechnology 23: 37-43, 2016.

Cubillos, F. "Exploiting budding yeast natural variation for industrial processes". Curr. Genet. 2016. PUBMED

Olivares-Yañez, C., Emerson, J., Kettenbach, A., Loros, J.J., Dunlap, J.C. and Larrondo, L.F. "Modulation of circadian gene expression and metabolic compensation by the RCO-1 Corepressor of Neurospora crassa". Genetics 204(1):163-76, 2016. PUBMED

Montenegro-Montero, A. and Larrondo, L.F. "In the Driver's Seat: the case for transcriptional regulation and coupling as relevant determinants of the circadian transcriptome and proteome in eukaryotes". Journal of Biological Rhythms, (31)1:37-47. PUBMED

Hevia, M.A., Canessa, P. and Larrondo, L.F. "Circadian clocks and the regulation of virulence in fungi: Getting up to speed". Semi Cell Dev Biol, 2016. DOI: 10.1016/j.semcdb.2016.03.021. PUBMED

[19] K. A. Feeney, L. L. Hansen, M. Putker, C. Olivares-Yañez, J. Day, L. J. Eades, L. F. Larrondo, N. P. Hoyle, J. S. O’Neill, and G. van Ooijen, “Daily magnesium fluxes regulate cellular timekeeping and energy balance,” Nature, vol. 532, no. 7599, pp. 375–379, Apr. 2016. PUBMED

F. Salinas, C. G. de Boer, V. Abarca, V. García, M. Cuevas, S. Araos, L. F. Larrondo, C. Martinez, and F. A. Cubillos, “Natural variation in non-coding regions underlying phenotypic diversity in budding yeast,” Scientific Reports, vol. 6, p. 21849, 2016. PUBMED

[17] E. I. Kessi-Pérez, S. Araos, V. García, F. Salinas, V. Abarca,
L. F. Larrondo, C. Martinez and F. A. Cubillos “RIM15 antagonistic pleiotropy is responsible for differences in fermentation and stress response kinetics in budding yeast,” FEMS Yeast Research, vol. 16, no. 3, p. fow021, May 2016. PUBMED

Castillo, L., Plaza V., Larrondo L. F., Canessa, P. Recent advances in the study of the plant pathogenic fungus Botrytis cinerea and its interaction with the environment. Current Protein & Peptide Science. 2016. PUBMED


A. Montenegro-Montero, P. Canessa, and L. F. Larrondo, Chapter Four-Around the Fungal Clock: Recent Advances in the Molecular Study of Circadian Clocks in Neurospora and Other Fungi. Advances in genetics 92, 107-184. 2015. PUBMED

[14] A. Vega,
P. Canessa, G. Hoppe, I. Retamal, T. C. Moyano, J. Canales, R. A. Gutiérrez, and J. Rubilar, “Transcriptome analysis reveals regulatory networks underlying differential susceptibility to Botrytis cinerea in response to nitrogen availability in Solanum lycopersicum,” Front. Plant Sci., vol. 6, no. 142, p. 1964, Nov. 2015. PUBMED

[13] M. E. Sturm, M. Assof, M. Fanzone, C. Martínez,
M. A. Ganga, V. Jofré, M. L. Ramirez, and M. Combina, “Relation between coumarate decarboxylase and vinylphenol reductase activity with regard to the production of volatile phenols by native Dekkera bruxellensis strains under ‘wine-like’ conditions,” International Journal of Food Microbiology, vol. 206, pp. 51–55, Aug. 2015. PUBMED

A. Montenegro-Montero, A. Goity, and L. F. Larrondo, “The bZIP Transcription Factor HAC-1 Is Involved in the Unfolded Protein Response and Is Necessary for Growth on Cellulose in Neurospora crassa,” PLoS ONE, vol. 10, no. 7, p. e0131415, Jul. 2015. PUBMED

M. A. Hevia, P. Canessa, H. Müller-Esparza, and L. F. Larrondo, “A circadian oscillator in the fungus Botrytis cinerea regulates virulence when infecting Arabidopsis thaliana.,” Proc. Natl. Acad. Sci. U.S.A., vol. 112, no. 28, pp. 8744–8749, Jul. 2015. PUBMED

[10] P. Coronado, S. Aguilera,
L. Carmona, L. Godoy, C. Martínez, and M. A. Ganga, “Comparison of the behaviour of Brettanomyces bruxellensis strain LAMAP L2480 growing in authentic and synthetic wines,” Antonie van Leeuwenhoek, vol. 107, no. 5, pp. 1217–1223, 2015. PUBMED

[9] V. Plaza, Y. Lagües, M. Carvajal, L. A. Pérez-García, H. M. Mora-Montes,
P. Canessa, L. F. Larrondo, and L. Castillo, “bcpmr1 encodes a P-type Ca(2+)/Mn(2+)-ATPase mediating cell-wall integrity and virulence in the phytopathogen Botrytis cinerea.,” Fungal Genet. Biol., vol. 76, pp. 36–46, Mar. 2015. PUBMED

L. F. Larrondo, C. Olivares-Yañez, C. L. Baker, J. J. Loros, and J. C. Dunlap, “Circadian rhythms. Decoupling circadian clock protein turnover from circadian period determination.,” Science, vol. 347, no. 6221, pp. 1257277–1257277, Jan. 2015. PUBMED


J. Valdes, P. Tapia, V. Cepeda, J. Varela, L. Godoy, F. A. Cubillos, E. Silva, C. Martinez, and M. A. Ganga, “Draft genome sequence and transcriptome analysis of the wine spoilage yeast Dekkera bruxellensis LAMAP2480 provides insights into genetic diversity, metabolism and survival,” FEMS Microbiology Letters, vol. 361, no. 2, pp. 104–106, Dec. 2014. PUBMED

[6] C. Hori, T. Ishida, K. Igarashi, M. Samejima, H. Suzuki, E. Master, P. Ferreira, F. J. Ruiz-Dueñas, B. Held,
P. Canessa, L. F. Larrondo, M. Schmoll, I. S. Druzhinina, C. P. Kubicek, J. A. Gaskell, P. Kersten, F. S. John, J. Glasner, G. Sabat, S. S. BonDurant, K. Syed, J. Yadav, A. C. Mgbeahuruike, A. Kovalchuk, F. O. Asiegbu, G. Lackner, D. Hoffmeister, J. Rencoret, A. Gutiérrez, H. Sun, E. Lindquist, K. Barry, R. Riley, I. V. Grigoriev, B. Henrissat, U. Kües, R. M. Berka, A. T. Martínez, S. F. Covert, R. A. Blanchette, and D. Cullen, “Analysis of the Phlebiopsis gigantea Genome, Transcriptome and Secretome Provides Insight into Its Pioneer Colonization Strategies of Wood,” PLoS Genet., vol. 10, no. 12, p. e1004759, Dec. 2014. PUBMED

[5] M. T. Weirauch, A. Yang, M. Albu, A. G. Cote,
A. Montenegro-Montero, P. Drewe, H. S. Najafabadi, S. A. Lambert, I. Mann, K. Cook, H. Zheng, A. Goity, H. van Bakel, J.-C. Lozano, M. Galli, M. G. Lewsey, E. Huang, T. Mukherjee, X. Chen, J. S. Reece-Hoyes, S. Govindarajan, G. Shaulsky, A. J. M. Walhout, F.-Y. Bouget, G. Ratsch, L. F. Larrondo, J. R. Ecker, and T. R. Hughes, “Determination and inference of eukaryotic transcription factor sequence specificity.,” Cell, vol. 158, no. 6, pp. 1431–1443, Sep. 2014. PUBMED

[4] C. I. Hong, J. Zámborszky, M. Baek, L. Labiscsak, K. Ju, H. Lee,
L. F. Larrondo, A. Goity, H. S. Chong, W. J. Belden, and A. Csikász-Nagy, “Circadian rhythms synchronize mitosis in Neurospora crassa.,” Proc. Natl. Acad. Sci. U.S.A., vol. 111, no. 4, pp. 1397–1402, Jan. 2014. PUBMED

[3] V. D. Gooch, A. E. Johnson, B. J. Bourne, B. T. Nix, J. A. Maas, J. A. Fox, J. J. Loros,
L. F. Larrondo, and J. C. Dunlap, “A kinetic study of the effects of light on circadian rhythmicity of the frq promoter of Neurospora crassa.,” J. Biol. Rhythms, vol. 29, no. 1, pp. 38–48, Feb. 2014. PUBMED

[2] V. D. Gooch, A. E. Johnson,
L. F. Larrondo, J. J. Loros, and J. C. Dunlap, “Bright to dim oscillatory response of the Neurospora circadian oscillator.,” J. Biol. Rhythms, vol. 29, no. 1, pp. 49–59, Feb. 2014. PUBMED

P. Canessa, J. Schumacher, M. A. Hevia, P. Tudzynski, and L. F. Larrondo, “Assessing the effects of light on differentiation and virulence of the plant pathogen Botrytis cinerea: characterization of the White Collar Complex.,” PLoS ONE, vol. 8, no. 12, p. e84223, 2013. PUBMED